BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018B03LP1|AL427257
(1142 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 131 3e-30
>3x_Contig1807
Length = 66587
Score = 131 bits (66), Expect = 3e-30
Identities = 148/174 (85%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 293 ggtcttacgaagtaccagaggcatttgcacaatgtacttatctag-cgcagatttacgtg 351
|||||||||||||||||||||| || ||| |||| |||||| | | || |||| ||
Sbjct: 54159 ggtcttacgaagtaccagaggcgttcgcaggatgtcattatctgggcacaaatttctatg 54100
Query: 352 tcctacaaaatcaactctttaccataccaaacttatatcaaagatctagaatggatatct 411
|||||||||||||||||||||||||||| | ||||||| |||||||| ||||||||||
Sbjct: 54099 tcctacaaaatcaactctttaccatacccatgttatatcgaagatctataatggatatca 54040
Query: 412 ccagcagaggtatacaaactcatcatggaacgtctacaaaagaacaagtatttc 465
||||| ||| ||| ||| || || |||||||||||||||||||||||||||||
Sbjct: 54039 ccagcggagatatgcaagctggtcgtggaacgtctacaaaagaacaagtatttc 53986
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6944
Number of Sequences: 1807
Number of extensions: 6944
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 1142
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1126
effective length of database: 10,329,639
effective search space: 11631173514
effective search space used: 11631173514
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)